pca, opls-da model validations, functional annotation  (MetWare Ltd)

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Proportion of different classes of compounds for the metabolites detected from jalapeño and serrano chile peppers using a widely targeted metabolomics approach.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Top 10 most highly upregulated and downregulated metabolites.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Top 10 differentially expressed upregulated metabolites with KEGG database annotation.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques: Phospho-proteomics

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Summary of the different functions annotated for the differentially expressed metabolites (DEMs) using the KEGG database. Annotations revealed that the majority of the DEMs are involved in metabolic pathways and in the biosynthesis of secondary metabolites and cofactors. Note: A DEM can have multiple annotated functions.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques:

Journal: Metabolites

Article Title: Widely Targeted Metabolomics Reveals Metabolite Diversity in Jalapeño and Serrano Chile Peppers ( Capsicum annuum L.)

doi: 10.3390/metabo13020288

Figure Lengend Snippet: Rich factor (RF) values for the differentially expressed metabolites with annotated functions on the KEGG database. RF is the ratio of the number of differentially expressed metabolites in a pathway to the total number of metabolites annotated in the same pathway (RF for a pathway = no. of differentially expressed metabolites/total number of metabolites). Terpenoid backbone biosynthesis had significant enrichments, with an RF value of 1.

Article Snippet: The PCA, OPLS-DA model validations, and functional annotation of the different metabolites were all performed at MetWare ® Bio.

Techniques: